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anota2seq specifications


Unique identifier OMICS_20340
Name anota2seq
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes


No version available


  • person_outline Ola Larsson
  • person_outline Ivan Topisirovic

Publication for anota2seq

anota2seq citation


Polysome profiling in small tissue samples

Nucleic Acids Res
PMCID: 5758873
PMID: 29069469
DOI: 10.1093/nar/gkx940

[…] vels). Translational buffering is distinct in the sense that it acts to maintain protein levels constant while the former two modes of regulation will influence protein levels. The recently developed anota2seq algorithm efficiently identifies and separates these three regulatory modes and was employed for analysis. As expected, genes whose transcription was previously identified as sensitive to p5 […]

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anota2seq institution(s)
Department of Oncology-Pathology, Science for Life Laboratory, Karolinska Institutet, Stockholm, Sweden; Lady Davis Institute, SMBD Jewish General Hospital, Montreal, Canada; Departments of Oncology, Experimental Medicine, and Biochemistry McGill University, Montreal, Canada; Cancer Program, Biomedicine Discovery Institute and Department of Anatomy & Developmental Biology, Monash University, VIC, Australia; Prostate Cancer Translational Research Laboratory, Peter MacCallum Cancer Centre, Melbourne, VIC, Australia

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