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Antibiotic resistance gene detection software tools | Shotgun metagenomic sequencing data analysis

Antibiotic resistance gene detection software tools | Shotgun metagenomic sequencing data analysis

Environmental dissemination of antibiotic resistance genes (ARGs) has become an increasing concern for public health. Metagenomics approaches can effectively detect broad profiles of ARGs in environmental samples; however, the detection and subsequent classification of ARG-like sequences are time consuming and have been severe obstacles in employing metagenomic methods.

Source text:
(Yang et al., 2016) ARGs-OAP: online analysis pipeline for antibiotic resistance genes detection from metagenomic data using an integrated structured ARG-database. Bioinformatics.

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