APEX Quantitative Proteomics Tool pipeline

APEX Quantitative Proteomics Tool specifications

Information


Unique identifier OMICS_02485
Name APEX Quantitative Proteomics Tool
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
License GNU General Public License version 2.0
Computer skills Medium
Stability Stable
Requirements Trans-Proteomic Pipeline
Maintained Yes

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Documentation


Publication for APEX Quantitative Proteomics Tool

APEX Quantitative Proteomics Tool citation

2015
PMCID: 4415580

[…] the uniprotkb/swiss-prot database 2012_06 (536,489 sequences, 190,389 898 residues), using only homo sapiens entries., protein quantitation was performed by label-free spectral counting using the apex quantitative proteomics tool v.1.1 as described previously [13]. only mascot-identified peptides with peptideprophet probability ≥0.9 and proteins with proteinprophet probability ≥0.95 […]

APEX Quantitative Proteomics Tool institution(s)
Pathogen Functional Genomics Resource Center, J Craig Venter Institute, Chinakville, MD, USA

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