APID Interactomes | Protein-protein interaction databases : Protein interaction databases

Identifies and handles all the proteins and maps them into the reference proteomes of each species. APID is a bioinformatics database developed to provide protein interactomes at different quality levels and allowing their analysis and visualization as networks. This method is focused solely on the generation and delivery of unified compendiums of known and experimentally proven protein–protein physical interactions (PPIs).

APID Interactomes specifications

Dataset Forum (0)

Information

Unique identifier	OMICS_18094
Restrictions to use	None
Community driven	No
Data access	File download, Browse
User data submission	Not allowed
Content license	CC Attribution-NonCommercial
Maintained	Yes

Taxon

Animals
Archaebacteria
Eubacteria
Fungi
Plants
Prions
Protists
Viruses

Documentation

Documentation: http://cicblade.dep.usal.es:8080/APID/init.action#tabr4

Maintainer

Javier De Las Rivas <>

APID Interactomes article

APID interactomes: providing proteome-based interactomes with controlled quality for multiple species and derived networks

2016 Nucleic Acids Res

PMID: 27131791

DOI: 10.1093/nar/gkw363

APID Interactomes institution(s)

Cancer Research Center (CiC-IBMCC, CSIC/USAL/IBSAL), Consejo Superior de Investigaciones Científicas (CSIC) and Universidad de Salamanca (USAL), Salamanca, Spain

APID Interactomes funding source(s)

This work was supported by Spanish Government, Ministerio de Economia y Competitividad, Instituto de Salud Carlos III [PI12/00624 and PI15/00328]; and EU Joint Programme, JPND [AC14/00024], Regional Government, Junta de Castilla y Leon [BIO/SA68/13].

APID Interactomes review

diego

2017-05-30, 10:15

Dataset

Tremendly useful for building protein-protein interaction networks.