AptaTools specifications


Unique identifier OMICS_09204
Name AptaTools
Software type Pipeline/Workflow
Interface Command line interface, Graphical user interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes


No version available


  • person_outline Pawel F. Przytycki

Publications for AptaTools

AptaTools citations


Aptamer Cell Based Selection: Overview and Advances

PMCID: 5618307
PMID: 28805744
DOI: 10.3390/biomedicines5030049

[…] ny researchers. In this regard, a powerful tool comes from Hoinka et al. []. They developed a new open-source platform (referred as AptaGUI) for the dynamic visualization of HT-SELEX data by applying AptaTools package []. AptaTools includes algorithms for HTS data preprocessing and allows tracking of the changes of individual aptamers and clusters, to perform structure-based analysis and identify […]


Opportunities in the design and application of RNA for gene expression control

Nucleic Acids Res
PMCID: 4838379
PMID: 26969733
DOI: 10.1093/nar/gkw151

[…] nables facile comparison of populations for sequence distribution, generation of sequence family clusters and calculation of sequence enrichment throughout the course of a selection (). Additionally, AptaTools is a set of computational tools developed for data processing, tracking changes in aptamer families throughout selection cycles and identifying sequence-structure motifs. These tools have al […]

AptaTools institution(s)
National Center of Biotechnology Information, National Library of Medicine, NIH, Bethesda, MD, USA; Department of Microbiology & Immunology, University of Miami Miller School of Medicine, Miami, FL, USA; Laboratory of Hemostasis, Division of Hematology, Center for Biologics Evaluation and Research, Food and Drug Administration, Silver Spring, MD, USA

AptaTools reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review AptaTools