AptaTools specifications

Information


Unique identifier OMICS_09204
Name AptaTools
Software type Pipeline/Workflow
Interface Command line interface, Graphical user interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


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Maintainer


  • person_outline Pawel F. Przytycki <>

Publications for AptaTools

AptaTools in publications

 (2)
PMCID: 4838379
PMID: 26969733
DOI: 10.1093/nar/gkw151

[…] facile comparison of populations for sequence distribution, generation of sequence family clusters and calculation of sequence enrichment throughout the course of a selection (). additionally, aptatools is a set of computational tools developed for data processing, tracking changes in aptamer families throughout selection cycles and identifying sequence-structure motifs. these tools […]

PMCID: 4881754
PMID: 26461977
DOI: 10.1038/mtna.2015.26

[…] aptagui, a new open-source and platform-independent graphical user interface (gui) for the dynamic visualization of ht-selex data. in particular, aptagui includes support for applications of our aptatools package (http://www.ncbi.nlm.nih.gov/cbbresearch/przytycka/index.cgi#aptatools) that contains many useful algorithms for ht-selex analysis, including but not limited to data pre-processing, […]


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AptaTools institution(s)
National Center of Biotechnology Information, National Library of Medicine, NIH, Bethesda, MD, USA; Department of Microbiology & Immunology, University of Miami Miller School of Medicine, Miami, FL, USA; Laboratory of Hemostasis, Division of Hematology, Center for Biologics Evaluation and Research, Food and Drug Administration, Silver Spring, MD, USA

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