Aquerium specifications

Information


Unique identifier OMICS_14410
Name Aquerium
Alternative name Architecture Querying Podium
Interface Web user interface
Restrictions to use None
Input data Protein sequences OR domains OR genome taxonomic identifiers
Input format FASTA, XML
Output data Sunburst tree, taxonomic identifiers,the number of occurrences for each organism, taxonomically classified organism information.
Output format JSON, CSV, SVG
Programming languages Javascript, Python
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Ogun Adebali

Publication for Architecture Querying Podium

library_books

Aquerium: a web application for comparative exploration of domain-based protein occurrences on the taxonomically clustered genome tree

2016 Proteins
PMCID: 5167639
PMID: 27802571
DOI: 10.1002/prot.25199
Aquerium institution(s)
UT-ORNL Graduate School of Genome Science and Technology, University of Tennessee, Knoxville, TN, USA; Department of Microbiology, University of Tennessee, Knoxville, TN, USA; Computer Science and Mathematics Division, Oak Ridge National Laboratory, Oak Ridge, TN, USA
Aquerium funding source(s)
Supported by National Institutes of Health; Grant numbers: GM072285 and DE024463.

Aquerium reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review Aquerium