0 user reviews
0 user reviews
Already have an account? Sign in to review this tool.
No review has been posted.
No open topic.
- Arabidopsis thaliana
- Restrictions to use:
- Academic users only
- Community driven:
- User data submission:
- Programming languages:
- Data access:
- File download, Web user interface
- Documentation: http://www.megabionet.org/atpid/webfile/faq_help.php
- AtPID Team <tlshi at bio.ecnu.edu.cn>
(Lv et al., 2016) AtPID: a genome-scale resource for genotype–phenotype associations in Arabidopsis. Nucleic Acids Res.
(Li et al., 2011) AtPID: the overall hierarchical functional protein interaction network interface and analytic platform for Arabidopsis. Nucleic acids research.
(Cui et al., 2008) AtPID: Arabidopsis thaliana protein interactome database--an integrative platform for plant systems biology. Nucleic Acids Res.
(Lv et al., 2016) AtPID: a genome-scale resource for genotype–phenotype associations in Arabidopsis. Nucleic Acids Research.
Center for Bioinformatics and Computational Biology, and the Institute of Biomedical Sciences, School of Life Sciences, East China Normal University, Shanghai, China; School of Finance and Statistics, East China Normal University, Shanghai, China
National Key Basic Research and Development Plan 973 (2013CB127005), National High Technology Research and Development Program of China (2015AA020108), National Science Foundation of China (31171264, 31401133, 31671377), 111 Project (B14019), Science and Technology Commission of Shanghai Municipality (14YF1404400), Ernst Mach-Stipendien Eurasia-Pacific Uninet programme, China Postdoctoral Science Foundation funded project and the Supercomputer Center of East China Normal University.
Link to literature
Related Protein-protein interaction data tools
Uses web browsers to visualize and manage protein-protein interaction (PPI)…
Uses web browsers to visualize and manage protein-protein interaction (PPI) networks. cisPath is an R package that offers functions as a method used to combine the PPI information generated from…
Parses the PSI-25 files generated by the IntAct data repository which collects,…
Parses the PSI-25 files generated by the IntAct data repository which collects, curates and stores thousands of protein interactions. Rintact is an R package which provides two main functions: (i)…
Uses for the analysis of protein interaction data. PpiStats is developed as an…
Uses for the analysis of protein interaction data. PpiStats is developed as an explicit probability model and resultant likelihood method to estimate node degree on portions of the interactome…
Identifies passages with experimental methods for physical interactions between…
Identifies passages with experimental methods for physical interactions between proteins as an information retrieval search task. BIOCEMID takes a BioC article as input, processes it, and returns the…
A literature-based gene resource for exploring epithelial-mesenchymal…
A literature-based gene resource for exploring epithelial-mesenchymal transition (EMT)-related human genes. dbEMT includes literature data, clinical relevant variants, gene expression profiles and…