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ARALIP specifications


Unique identifier OMICS_03016
Restrictions to use None
Maintained Yes

Publication for ARALIP


Acyl-Lipid Metabolism

PMCID: 3563272
PMID: 23505340
DOI: 10.1199/tab.0161

ARALIP citations


Synteny analysis of genes and distribution of loci controlling oil content and fatty acid profile based on QTL alignment map in Brassica napus

BMC Genomics
PMCID: 5639739
PMID: 29025408
DOI: 10.1186/s12864-017-4176-6

[…] e genes related to these biosyntheses for an afterward detection of potential candidate genes for oil improvement. Thus, A. thaliana genes related to these biosyntheses were acquired from the website ARALIP ( and TAIR ( []. Brassica genes were identified based on homology to A. thaliana genes, with a score > 80, by using blastn (using A. thal […]


From chromatogram to analyte to metabolite. How to pick horses for courses from the massive web resources for mass spectral plant metabolomics

PMCID: 5499862
PMID: 28520864
DOI: 10.1093/gigascience/gix037

[…] y; ALEX: Analysis of Lipid Experiments; AMDIS: Automated Mass Spectral Deconvolution And Identification System; ANOVA: analysis of variance; apLCMS: Adaptive Processing of High-Resolution LC-MS data; ARALIP: Arabidopsis acyl-lipid metabolism; ASCII: American Standard Code for Information Interchange; BKM-react: BRENDA-KEGG-MetaCyc reactions; BNICE: Biochemical Network Integrated Computational Expl […]


Comparative Transcriptomic Analysis of Two Brassica napus Near Isogenic Lines Reveals a Network of Genes That Influences Seed Oil Accumulation

Front Plant Sci
PMCID: 5040705
PMID: 27746810
DOI: 10.3389/fpls.2016.01498

[…] to identify genes related to acyl-lipid metabolism, B. napus gene sequences were analyzed against a list of acyl-lipid metabolism genes obtained from the “Arabidopsis Acyl-Lipid Metabolism” website (ARALIP). Locally installed MultiLoc2 tool was used for prediction of sub-cellular localization of proteins ().To analyze the temporal expression of acyl-lipid metabolism genes in sequential stages of […]


Transcriptome analysis of Brassica napus pod using RNA Seq and identification of lipid related candidate genes

BMC Genomics
PMCID: 4619414
PMID: 26499887
DOI: 10.1186/s12864-015-2062-7

[…] Brassica napus database ( In order to distinguish genes homologous to the genes involved in lipid metabolism collected in ARABIDOPSIS ACYL-LIPID METABOLISM (, sequence alignment was performed between genes in the QTL regions and the lipid-related genes were identified by blastn with evalue less than 10−5. […]


An annotated database of Arabidopsis mutants of acyl lipid metabolism

PMCID: 4371839
PMID: 25487439
DOI: 10.1007/s00299-014-1710-8

[…] tral database that includes almost all acyl lipid-associated mutants and related information, we consolidated several sources. We started with data from the Arabidopsis Acyl-Lipid Metabolism website (ARALIP:, an annotated database of lipid-related genes known or suspected to participate in Arabidopsis acyl lipid metabolism. Specific annotations in this database […]


Comparative deep transcriptional profiling of four developing oilseeds

Plant J
PMCID: 3507003
PMID: 21851431
DOI: 10.1111/j.1365-313X.2011.04751.x

[…] nts, the Arabidopsis proteome is the most completely annotated and experimentally verified, and includes a recent update of information on several hundred genes involved in lipid metabolism (; Orthologs of ∼13 000–17 000 Arabidopsis proteins were represented in the four oilseeds (). The EST counts assigned to each gene were expressed as ESTs/100 000 ESTs and t […]


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