ArchiP statistics

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ArchiP specifications

Information


Unique identifier OMICS_24852
Name ArchiP
Alternative name Architectures of Proteins
Interface Web user interface
Restrictions to use None
Input data A 3D structure or a PDB ID.
Input format PDB
Programming languages FreePascal
Computer skills Basic
Version beta.1603061903
Stability Beta
Maintained Yes

Maintainers


  • person_outline Evgeniy Aksianov <>
  • person_outline Andrei Alexeevski <>

Additional information


http://mouse.belozersky.msu.ru/~evgeniy/cgi-bin/proton/proton.php?subproj=archip&page=help&data=alldocs

Information


Unique identifier OMICS_24852
Name ArchiP
Alternative name Architectures of Proteins
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Windows
Programming languages FreePascal
Computer skills Advanced
Version beta.1603061903
Stability Beta
Maintained Yes

Versioning


Add your version

Maintainers


  • person_outline Evgeniy Aksianov <>
  • person_outline Andrei Alexeevski <>

Additional information


http://mouse.belozersky.msu.ru/~evgeniy/cgi-bin/proton/proton.php?subproj=archip&page=help&data=alldocs

Publication for Architectures of Proteins

ArchiP in publications

 (23)
PMCID: 5872058
PMID: 29364182
DOI: 10.3390/bios8010010

[…] for il8, dcn, and vegf to significantly improve assay performance and reach sensitivities similar to respective fluorescence assays in spiked urine. , chip platform used was the proprietary archip epoxy (ep 02799374; us 10/490543) and arrayit® supernitro microarray. the capture antibodies (cab) were spotted using the arrayit nanoprint contact spotter with the smp5 pin. as assay buffer […]

PMCID: 5807478
PMID: 28879577
DOI: 10.1007/s10237-017-0958-7

[…] and/or offer real-time guidance to the surgeon during the procedures., real-time algorithms running on both cpus and gpus have been extensively discussed in literature showing promising results (archip et al. ; dumpuri et al. ; joldes et al. , ; škrinjar et al. , ; warfield et al. ). in most cases, finite element models are used to compute 3d deformation fields (of the whole brain) resulting […]

PMCID: 5435982
DOI: 10.1155/2017/8691505

[…] are compressed secondary to canal stenosis, reducing local tissue contrast., in the literature, there were only a few atlas-free segmentation methods for the human spinal canal or spinal cord [, ]. archip et al. presented a knowledge-based approach to identify the spinal cord in ct images of the thorax []. they constructed a task-oriented anatomical structure map to define the lumbar vertebrae. […]

PMCID: 5548999
PMID: 28794677
DOI: 10.3897/phytokeys.79.11215

[…] ex a. gray) miquel; prolus. fl. jap. 139.1866. , platanthera angustifolia (lindl.) rchb.f., otia bot. hamburg. 1: 39.1878. , herminium angustifolium (lindl.) ridl. in forbes, nat. wand. east. archip. 519. 1885. , herminium angustifolium var. longicruris (c. wright ex a. gray) makino, bot. mag. (tokyo) 10: 109. 1896. , herminium altigenum schltr., repert. spec. nov. regni veg. […]

PMCID: 5346835
PMID: 28293287
DOI: 10.1186/s13036-017-0054-7

[…] for the detection of c-reactive protein (crp), which has been identified as a biomarker for inflammation, sepsis and tissue necrosis []. the crp binding aptamer was covalently immobilized on archip epoxy. for the detection of bound crp, dyes labeled secondary antibodies were used for generating optical signals in a sandwich format. they claimed that the aptamer-based biochip assay […]


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ArchiP institution(s)
Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, Russia
ArchiP funding source(s)
Supported, in part, by Russian Foundation of Basic Research, grants 13-07-00969 and 14-04-31709_mol_a.

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