ARCHS4 specifications


Unique identifier OMICS_21639
Alternative name all RNA-seq and ChIP-seq sample and signature search
Interface Web user interface
Restrictions to use None
Programming languages Javascript, PHP, AJAX
Computer skills Basic
Stability Stable
Maintained Yes


  • person_outline Avi Ma’ayan

Additional information

Publication for all RNA-seq and ChIP-seq sample and signature search

ARCHS4 citation


Datasets2Tools, repository and search engine for bioinformatics datasets, tools and canned analyses

Sci Data
PMCID: 5827688
PMID: 29485625
DOI: 10.1038/sdata.2018.23

[…] other significant portion of the canned analyses currently contained within Datasets2Tools were generated by Clustergrammer to visualize interactive heatmaps of RNA-seq datasets from GEO processed by ARCHS4. A smaller portion of canned analyses available within Datasets2Tools are datasets generated by the LINCS consortium and stored within the LINCS Data Portal. For a complete overview of the anal […]

ARCHS4 institution(s)
Department of Pharmacological Sciences, Mount Sinai Center for Bioinformatics, Icahn School of Medicine at Mount Sinai, New York, NY, USA; Big Data to Knowledge, Library of Integrated Network-based Cellular Signatures, Data Coordination and Integration Center (BD2K-LINCS DCIC); Mount Sinai Knowledge Management Center for Illuminating the Druggable Genome (KMC-IDG)
ARCHS4 funding source(s)
Partially supported by the National Institutes of Health (NIH) grants U54HL127624 and U54CA189201, as well as cloud credits from the NIH BD2K Commons Cloud Credit Pilot project.

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