ARCS specifications

Information


Unique identifier OMICS_15092
Name ARCS
Alternative name Assembly Roundup by Chromium Scaffolding
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data DNA alignment
Input format BAM
Output data A tab-separated value file listing all possible oriented sequence pairs, the number of supporting barcodes with gap sizes arbitrarily set at 10 bp.
Output format GV
Biological technology Illumina
Operating system Unix/Linux, Mac OS
Programming languages C++
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Requirements Boost, GCC, Autotools
Maintained Yes

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Maintainer


  • person_outline Rene Warren <>

Publication for Assembly Roundup by Chromium Scaffolding

ARCS institution(s)
BC Cancer Agency, Genome Sciences Centre, Vancouver, BC, Canada
ARCS funding source(s)
This work has been supported by the National Human Genome Research Institute of the National Institutes of Health (under award No. R01HG007182), with additional support provided by Genome Canada, Genome British Columbia, and the British Columbia Cancer Foundation.

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