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ARDB specifications

Information


Unique identifier OMICS_22291
Name ARDB
Alternative name The Androgen Receptor gene mutations Database
Restrictions to use None
Community driven No
Data access File download
User data submission Allowed
Maintained Yes

Maintainer


  • person_outline Bruce Gottlieb

Publications for The Androgen Receptor gene mutations Database

ARDB citations

 (93)
library_books

A Polyphasic and Taxogenomic Evaluation Uncovers Arcobacter cryaerophilus as a Species Complex That Embraces Four Genomovars

2018
Front Microbiol
PMCID: 5934430
PMID: 29755434
DOI: 10.3389/fmicb.2018.00805

[…] ia Database (VFDB) (Chen et al., ), Victors Database (University of Michigan, USA) and PATRIC_VF (Wattam et al., ). Antibiotic resistance genes were searched using the Antibiotic Resistance Database (ARDB) (Liu and Pop, ) and the Comprehensive Antibiotic Resistance Database (CARD) (Jia et al., ). The five mentioned databases are included at the Specialty Genes tool available at the PATRIC server ( […]

call_split

Draft Genome Sequence of Multidrug Resistant Escherichia coli NIVEDI P44, Isolated from a Chicken Fecal Sample in Northeast India

2018
Genome Announc
PMCID: 5920187
PMID: 29700135
DOI: 10.1128/genomeA.00205-18
call_split See protocol

[…] red the tet(A) gene (encodes tetracycline resistance). PHAST analysis () detected 3 intact phages totaling 117.9 kb, which accounts for 2.46% of the total genome.Analysis by ResFinder version 2.1 (), ARDB (), and CARD () revealed the presence of the multiple antibiotic resistance genes blaDHA-1 (class C β-lactamase resistance), mph(A) (macrolide resistance), strA and strB (streptomycin resistance) […]

library_books

Draft Genome Sequence of Paucibacter aquatile CR182T, a Strain with Antimicrobial Activity Isolated from Freshwater of Nakdong River in South South Korea

2018
Genome Announc
PMCID: 5920192
PMID: 29700134
DOI: 10.1128/genomeA.00194-18

[…] ved in the biosynthesis of lantipeptide, hserlactone, bacteriocin, terpene, and a nonribosomal peptide synthetase (NRPS), a kind of amychelin. Analysis using the Antibiotic Resistance Genes Database (ARDB) () led to the identification of several genes (marB, mecR, pbp2b, catB2, bacA, smeD, and oprM) putatively involved in antibiotic resistance, some conferring specific resistance to macrolides, me […]

call_split

Genome sequencing and analysis of Alcaligenes faecalis subsp. phenolicus MB207

2018
Sci Rep
PMCID: 5827749
PMID: 29483539
DOI: 10.1038/s41598-018-21919-4
call_split See protocol

[…] CBI ‘Prokaryotic genome annotation pipeline’. Genomic context was visualized through GView. Prophage regions were identified using PHAST and antibiotic resistance was profiled through BLAST module of ARDB. Resistance Gene Identifier (RGI) listed at CARD site (https://card.mcmaster.ca/analyze/rgi), was used for mapping of resistome featuring homology and SNP model with strict criteria. […]

library_books

Comparative Genomic Analysis of a Clinical Isolate of Klebsiella quasipneumoniae subsp. similipneumoniae, a KPC 2 and OKP B 6 Beta Lactamases Producer Harboring Two Drug Resistance Plasmids from Southeast Brazil

2018
Front Microbiol
PMCID: 5820359
PMID: 29503635
DOI: 10.3389/fmicb.2018.00220

[…] somal RNA genes was carried out by RNAmmer (Lagesen et al., ).Further bioinformatics analyses included BLAST searches against AtlasT4SS database (Souza et al., )/Resfinder database (Zankari et al., )/ARDB-Antibiotic Resistance Genes Database (Liu and Pop, )/Comprehensive Antibiotic Resistance Database (Jia et al., ) and Virulence Factors database (VFDB) (Chen et al., ), which were performed for id […]

call_split

Multidrug Resistant Escherichia albertii: Co occurrence of β Lactamase and MCR 1 Encoding Genes

2018
Front Microbiol
PMCID: 5820351
PMID: 29503643
DOI: 10.3389/fmicb.2018.00258
call_split See protocol

[…] cs Technology, Co., Ltd. (). The filtered reads were assembled to generate one contig without gaps using SMRT Analysis 2.3.0 (). The protein-coding sequences (CDSs) were predicted using GeneMarkS (). ARDB (Antibiotic Resistance Genes Database) was used to search for antimicrobial resistance genes ().The complete genome sequences of SP140150 isolate are available at GenBank under the accession numb […]

Citations

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ARDB institution(s)
Lady Davis Institute for Medical Research, Jewish General Hospital, Montreal, QC, Canada; Department of Human Genetics, McGill University, Montreal, QC, Canada; Department of Medicine, McGill University, Montreal, QC, Canada
ARDB funding source(s)
Supported by the Canadian Institutes of Health Research, the Prostate Cancer Research Foundation of Canada, and the Kennedy’s Disease Association.

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