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ARF-PE specifications

Information


Unique identifier OMICS_09494
Name ARF-PE
Software type Package/Module
Interface Command line interface
Restrictions to use None
Biological technology Illumina
Operating system Unix/Linux
Computer skills Advanced
Stability No
Maintained No

Versioning


No version available

Maintainer


This tool is not available anymore.

Publication for ARF-PE

ARF-PE citation

library_books

Draft genome of a commonly misdiagnosed multidrug resistant pathogen Candida auris

2015
PMCID: 4562351
PMID: 26346253
DOI: 10.1186/s12864-015-1863-z

[…] paired-end reads is 158.19x, long paired-end reads is 175.51x and mate-pair reads is 205.78x. processed short paired-end reads (3.27 million) were used to generate (250–400) long fragments using arf-pe v0.2. 467178 long fragments were generated using 467178*2 paired end reads (ie, 14.29 % reads were used in long read generation). 467178 long fragments and 3269025*2 paired end reads used […]


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ARF-PE institution(s)
Institute of Bioinformatics and Biosignal Transduction, National Cheng Kung University, Tainan, Taiwan; Department of Computer Science and Information Engineering, National Cheng Kung University, Tainan, Taiwan

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