ARGs-OAP statistics

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Citations per year

Number of citations per year for the bioinformatics software tool ARGs-OAP
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Tool usage distribution map

This map represents all the scientific publications referring to ARGs-OAP per scientific context
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Associated diseases

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Popular tool citations

chevron_left Antibiotic resistance gene prediction chevron_right
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ARGs-OAP specifications

Information


Unique identifier OMICS_19600
Name ARGs-OAP
Software type Pipeline/Workflow
Interface Web user interface
Restrictions to use None
Programming languages Python, R
Computer skills Basic
Version 2.0
Stability Stable
Maintained Yes

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Maintainers


  • person_outline James M. Tiedje
  • person_outline Tong Zhang

Additional information


https://github.com/biofuture/Ublastx_stageone

Publications for ARGs-OAP

ARGs-OAP citation

library_books

Antibiotic mediated changes in the fecal microbiome of broiler chickens define the incidence of antibiotic resistance genes

2018
Microbiome
PMCID: 5811963
PMID: 29439741
DOI: 10.1186/s40168-018-0419-2

[…] ARG abundance was determined using ARGs-OAP []. Briefly, potential ARG reads and 16S rRNA genes were extracted, and ARG-like reads were identified and annotated using BLASTX by applying the combined ARG database of CARD (The Comprehens […]


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ARGs-OAP institution(s)
Environmental Biotechnology Laboratory, Department of Civil Engineering, University of Hong Kong, Hong Kong, China; Department of Plant, Soil, and Microbial Sciences, Michigan State University, East Lansing, MI, USA; School of Marine Sciences, Sun Yat-sen University, Guangzhou, China
ARGs-OAP funding source(s)
Supported by the University of Hong Kong and by Hong Kong GRF (172057/15E).

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