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argyle

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Allows to import, QC and analysis of Illumina Infinium genotyping arrays. Argyle serves to provide tools for non-expert users to perform quality checks and exploratory analyses of genotyping data. It consists of a suite of quality-control functions, normalization procedures, and utilities for visually and statistically summarizing such data. Also, detailed vignettes demonstrating common use cases are included as supporting information.

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argyle classification

argyle specifications

Software type:
Package/Module
Restrictions to use:
None
Programming languages:
R
Version:
0.2.0
Maintained:
Yes
Interface:
Command line interface
Operating system:
Unix/Linux, Mac OS, Windows
Computer skills:
Advanced
Stability:
Stable

argyle distribution

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Publications

Institution(s)

Department of Genetics, University of North Carolina, Chapel Hill, NC, USA

Funding source(s)

This work was supported in part by NIH grants F30MH103925 (APM), U19AI100625 (FPMV), U42OD010924 (Terry Magnuson), and the UNC Bioinformatics and Computational Biology Training Grant (T32GM067553).

Link to literature

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