ARH statistics

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Associated diseases

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ARH specifications

Information


Unique identifier OMICS_07626
Name ARH
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Advanced
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Axel Rasche <>

Publication for ARH

ARH in publications

 (2)
PMCID: 4298068
PMID: 25297679
DOI: 10.1186/1471-2164-15-879

[…] transcripts covering less than 60% of the gene locus (as described in figureĀ  )., the performance of the three approaches, eslima, eslimc and eslimt, was compared with three other methods: firma [], arh [] and cosie []. all the methods were run in r and applied to the same sample datasets. as indicated above, we used the set of 270 human genes known to undergo splicing as a reference []. […]

PMCID: 4141198
PMID: 24872507
DOI: 10.1093/jmcb/mju026

[…] via affymetrix powertools (atlas biolabs gmbh) as described previously (). relative expression profiles of individual probes after hub1 or control knockdown in u2os cells were processed using the arh method, resulting in metascores based on splice index (si), p-value (p, log10), and arh-value (arh, >0.03 significant). for initial analysis cel files were processed using altanalyze software […]


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ARH institution(s)
Department of Vertebrate Genomics, Max-Planck-Institute for Molecular Genetics, Berlin, Germany
ARH funding source(s)
Supported by European Union under its 6th Framework Programme with the grants SysProt (LSHG-CT-2006-037457); SysCo (LSHG-CT2006-037231); and Max Planck Society.

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