Protocols

arrayCyGHt specifications

Information


Unique identifier OMICS_02573
Name arrayCyGHt
Interface Web user interface
Restrictions to use None
Programming languages R
Computer skills Basic
Stability No
Maintained No

Publication for arrayCyGHt

arrayCyGHt citation

call_split

Simultaneous copy number gains of NUPR1 and ERBB2 predicting poor prognosis in early stage breast cancer

2012
BMC Cancer
PMCID: 3489802
PMID: 22938721
DOI: 10.1186/1471-2407-12-382
call_split See protocol

[…] ments, Sunnyvale, CA) and feature extraction was performed using GenePix Pro 6.0. Normalization and re-alignment of raw array CGH data were performed using the web-based array CGH analysis interface, ArrayCyGHt []. A print-tip Loess normalization method was used and each probe was mapped according to its genomic location in the UCSC genome browser (Human NCBI36/hg18). In total, 24,107 probes were […]

arrayCyGHt institution(s)
Microdissection Genomics Research Center, The Catholic University of Korea, Seoul, Korea

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