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Associated diseases

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ART specifications

Information


Unique identifier OMICS_00247
Name ART
Alternative names ART-ApplePie, ART-CranberryJuice, ART-CoconutCoffee, ART-PeachPie, ART-GrapeWine, ART-BananaPancakes, ART-VanillaIceCream, ART-ChocolateCherries, ART-ChocolateCherryCake, ART-GreatSmokyMountains, ART-MountRainier
Software type Application/Script
Interface Command line interface
Restrictions to use None
Biological technology Illumina, Life Technologies, Roche
Operating system Unix/Linux, Mac OS, Windows
Programming languages C++
Computer skills Advanced
Version MountRainier-2016-06-05
Stability Stable
Source code URL https://www.niehs.nih.gov/research/resources/assets/docs/artsrcmountrainier20160605linuxtgz.tgz
Maintained Yes

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Maintainers


  • person_outline Weichun Huang <>
  • person_outline Gabor Marth <>

Publication for ART

ART in publication

PMCID: 5903667
PMID: 29621238
DOI: 10.1371/journal.pgen.1007332

[…] as previously described., random dna sequence was generated using bioinformatics toolbox from matlab r2017b (mathworks). paired-end illumina high-throughput sequencing reads were simulated using art-mountrainier-2016-06-05 [] using illumina hiseq 2500 and hiseq 2000 built-in parameters with read length of 50, 100 or 150 bp and mean fragment size of 250, 500 or 800 bp ± 20% standard […]


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ART institution(s)
Biostatistics Branch, National Institute of Environmental Health Sciences, Research Triangle Park, NC, USA; Department of Biology, Boston College, Chestnut Hill, MA, USA
ART funding source(s)
Supported in part by Intramural Research Program of the National Institutes of Health; National Institute of Environmental Health Sciences (ES101765); National Human Genome Research Institute, National Institutes of Health (HG003698 and HG004719).

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