ASAP specifications

Information


Unique identifier OMICS_03172
Name ASAP
Alternative name A Systematic Annotation Package
Restrictions to use None
Maintained No

Publication for A Systematic Annotation Package

ASAP citations

 (2)
library_books

Analysis of the Lactobacillus casei supragenome and its influence in species evolution and lifestyle adaptation

2012
BMC Genomics
PMCID: 3496567
PMID: 23035691
DOI: 10.1186/1471-2164-13-533

[…] 80% identity over 80% of the length. Confirmation of the reciprocal BLAST data and additional ortholog predictions were generated from whole-genome Mauve alignment data using a custom script and the A Systematic Annotation Package (ASAP) for Community Analysis of Genomes database (https://asap.ahabs.wisc.edu) []. This script uses synteny to determine whether features should be confirmed as orthol […]

library_books

Mosquito Transcriptome Profiles and Filarial Worm Susceptibility in Armigeres subalbatus

2010
PLoS Negl Trop Dis
PMCID: 2857672
PMID: 20421927
DOI: 10.1371/journal.pntd.0000666

[…] ns, deposited in the Gene Expression Omnibus (GEO) database, and can be accessed via the web (accession number GSE20205). All transcript and EST data for this project are publicly accessible in ASAP (A Systematic Annotation Package for community analysis of genomes) as the complete collapsed set (ARALL v2) or through NCBI's GenBank database (accession numbers EU204979-EU212998) via the web. Micro […]

ASAP institution(s)
Genome Center of Wisconsin, University of Wisconsin, Madison, WI, USA

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