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Protocols

ASePCR specifications

Information


Unique identifier OMICS_03943
Name ASePCR
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability No
Maintained No

Publication for ASePCR

ASePCR citations

 (2)
library_books

Review: Alternative Splicing (AS) of Genes As An Approach for Generating Protein Complexity

2013
Curr Genomics
PMCID: 3664468
PMID: 24179441
DOI: 10.2174/1389202911314030004

[…] pproximately 900 records of cryptic and de novo 3’- and 5’-splice sites that were produced by over a thousand different mutations in approximately 360 genes [].Alternative splicing electronic RT-PCR (ASePCR) is a web-based tool that emulates RT–PCR in various tissues. NCBI provides a reverse e-PCR option which generates transcript models and ASePCR can then estimate the amplicon size for a given p […]

call_split

A new advance in alternative splicing databases: from catalogue to detailed analysis of regulation of expression and function of human alternative splicing variants

2007
BMC Bioinformatics
PMCID: 1904244
PMID: 17547750
DOI: 10.1186/1471-2105-8-180
call_split See protocol

[…] the PCR product is displayed (Figure , item 7) and is clickable in order to display restriction enzyme cut sites for this sequence (provided by RestrictionMapper []). Fast DB also provides a link to ASePCR [] that displays the predicted PCR products expected in various tissues.Finally, to assist the interpretation of microarray results, the "probe alignment" tool graphically provides the location […]


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ASePCR institution(s)
School of Agricultural Biotechnology, Seoul National University, Seoul, Korea

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