ASH specifications


Unique identifier OMICS_23544
Name ASH
Alternative name Alignment of Structural Homologs
Interface Web user interface
Restrictions to use None
Input data A PBD file or a PDB ID.
Input format PDB,TXT
Programming languages ANSI C
License Protein Data Bank Japan Software License
Computer skills Basic
Version 1.0
Stability Stable
Maintained Yes


  • person_outline Haruki kamura
  • person_outline Daron Standley
  • person_outline Hiroyuki Toh

Publications for Alignment of Structural Homologs

ASH citation


Structure and functional annotation of hypothetical proteins having putative Rubisco activase function from Vitis vinifera

PMCID: 4349933
PMID: 25780274
DOI: 10.6026/97320630011011

[…] is, signal transduction and the regulation of gene expression. Moreover, the functional regions of protein predicted using ProBis server, indicated structure conservation by pairwise local structural alignment of structural homologs in Protein Data Bank. The structure conservation is depicted in the structure (). […]

ASH institution(s)
Institute for Protein Research, Osaka University, Suita, Osaka, Japan; Japan Science and Technology Agency, Institute for Bioinformatics Research and Development (BIRD), Saitama, Japan; Medical Institute of Bioregulation, Kyushu University, Maidashi, Higashi-ku, Fukuoka, Japan

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