ASprofile specifications

Information


Unique identifier OMICS_01942
Software type Toolkit/Suite
Interface Command line interface
Restrictions to use None
Input data A set of gene annotations
Input format GTF
Operating system Unix/Linux
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Maintained Yes

Subtools


  • extract-as
  • extract-as-fpkm
  • collect-fpkm

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Maintainer


  • person_outline Liliana Florea <>

ASprofile article

ASprofile institution(s)
Center for Computational Biology, McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, MD, USA; Department of Medicine, Johns Hopkins University School of Medicine, Baltimore, MD, USA; Department of Computer Science, Johns Hopkins University, Baltimore, MD, USA; Department of Biostatistics, Bloomberg School of Public Health, Johns Hopkins University, Baltimore, MD, USA
ASprofile funding source(s)
Supported in part by the NSF award ABI-1159078 and NIH grants R01-HG006677 and R01-HG006102.

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