Assemblathon specifications

Information


Unique identifier OMICS_14889
Name Assemblathon
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Perl, R
Computer skills Advanced
Version 2.0
Stability Stable
Requirements qstaq.pl, FAlite.pm
Maintained Yes

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Documentation


Maintainer


  • person_outline Keith Bradnam <>

Assemblathon articles

Assemblathon institution(s)
Genome Center, UC, Davis, CA, USA; Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA; [etc]
Assemblathon funding source(s)
This work was supported by Wellcome Trust grant WT098051; ENCODE DAC (data analysis center) subaward on NHGRI grant no. U01HG004695 to the European Bioinformatics Institute; ENCODE DCC (data coordination center) NHGRI grant no. U41HG004568; Browser (Center for Genomic Science) NHGRI grant no. P41HG002371; GENCODE subaward on NHGRI grant no. U54HG004555 to the Sanger Center; NCI 1U24CA143858-01; NIH HG00064; PTDC/BIA-BEC/100616/2008; PTDC/EIA-EIA/100897/ 2008; the Fundacao para a Ciencia e Tecnologia; National Natural Science Foundation of China (30725008; 30890032; 30811130531; 30221004); a National Basic Research Program of China (973 program no. 2011CB809200); the Chinese 863 program (2006AA02Z177; 2006AA02Z334; 2006AA02A302; 2009AA022707); NSF, Major Research Instrumentation grant DBI 0821263 (University of Georgia, the Georgia Advanced Computing Resource Center), and NSF EF-0949453.

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