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Assembly Guided by Optical Restriction Alignment AGORA

Uses optical map information directly within the de Bruijn graph framework to help produce an accurate assembly of a genome that is consistent with the optical map information provided.

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AGORA forum

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AGORA classification

AGORA specifications

Software type:
Package/Module
Restrictions to use:
None
Computer skills:
Advanced
Maintained:
Yes
Interface:
Command line interface
Operating system:
Unix/Linux
Stability:
Stable

AGORA distribution

versioning

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No versioning.

AGORA support

Maintainer

  • Mihai Pop <>

Credits

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Publications

Institution(s)

Center for Bioinformatics and Computational Biology, University of Maryland-College Park, College Park, MD, USA

Link to literature

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