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Assembly polishing

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SV-STAT
Desktop

SV-STAT Structural Variation detection by STAck and Tail

Quantifies evidence for structural variation in genomic regions suspected of…

Quantifies evidence for structural variation in genomic regions suspected of harboring rearrangements. SV-STAT extends existing methods by adjusting a chimeric read’s support of a structural…

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ConsensusCore
Desktop

ConsensusCore

Powers Quiver (Python) and ConsensusTools (.NET). ConsensusCore is a library of…

Powers Quiver (Python) and ConsensusTools (.NET). ConsensusCore is a library of C++ algorithms for PacBio multiple sequence consensus.

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GenomicConsensu…
Desktop

GenomicConsensus

Maps PacBio reads to get consensus and variant calls. GenomicConsensus contains…

Maps PacBio reads to get consensus and variant calls. GenomicConsensus contains variantCaller, a main driver program which allows to apply two algorithms: Quiver that enables consensus accuracies on…

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