ARCS specifications

Unique identifier:
OMICS_15092
Software type:
Package/Module
Restrictions to use:
None
Input format:
BAM
Output format:
GV
Operating system:
Unix/Linux, Mac OS
License:
GNU General Public License version 3.0
Stability:
Stable
Maintained:
Yes
Name:
Assembly Roundup by Chromium Scaffolding
Interface:
Command line interface
Input data:
DNA alignment
Output data:
A tab-separated value file listing all possible oriented sequence pairs, the number of supporting barcodes with gap sizes arbitrarily set at 10 bp.
Biological technology:
Illumina
Programming languages:
C++
Computer skills:
Advanced
Requirements:
Boost, GCC, Autotools

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ARCS distribution

download

ARCS support

Maintainer

  • Rene Warren <>

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Publications

Institution(s)

BC Cancer Agency, Genome Sciences Centre, Vancouver, BC, Canada

Funding source(s)

This work has been supported by the National Human Genome Research Institute of the National Institutes of Health (under award No. R01HG007182), with additional support provided by Genome Canada, Genome British Columbia, and the British Columbia Cancer Foundation.

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