ATAC sequencing data analysis software tools

ATAC-seq allows simultaneous interrogation of factor occupancy, nucleosome positions in regulatory sites, and chromatin accessibility genome wide by considering the position of insertion and the distribution of insert lengths captured during the transposition reaction.

Source text:
(Buenrostro et al., 2013) Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position. Nat Methods.

Biological Steps

Unclassified tools