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ATPint specifications

Information


Unique identifier OMICS_24812
Name ATPint
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Maintainers


  • person_outline Gajendra Raghava <>
  • person_outline Jagat S Chauhan <>
  • person_outline Nitish K Mishra <>

Publication for ATPint

ATPint in publications

 (4)
PMCID: 5624866
PMID: 28970579
DOI: 10.1038/s41598-017-12471-8

[…] in prosite for the motif results in identifying 161 proteins, of which many are of the same family. put together, they identify only a portion of the ntpome., although other tools like nsitepred and atpint that are available for nucleotide-binding prediction in proteins show comparable results for ntp predictions for some proteins like rv1626, rv0350, rv3457c, and rv3285, our method […]

PMCID: 5535873
PMID: 28653986
DOI: 10.3390/ijms18071380

[…] were estimated using phobius (available online: http://phobius.sbc.su.se/), calmodulin target database (available online: http://calcium.uhnres.utoronto.ca/ctdb/pub_pages/search/index.htm), and atpint (available online: http://www.imtech.res.in/raghava/atpint/submit.html) servers. signal peptides were predicted using signa1p 3.0 (available online: http://www.cbs.dtu.dk/service/signalp/) []. […]

PMCID: 4169673
PMID: 25128829
DOI: 10.1016/j.bbrc.2014.08.028

[…] previous in vitro studies showed that this region of d2vp6 contains atp-binding/atpase motif , suggesting that d2btv could not replicate possibly due to loss of atpase activity. however, the program atpint, which predicts atp-interacting residues, (http://www.imtech.res.in/raghava/atpint/), suggests that the 10 residues in d2vp6, which included the 5 linker residues inserted into the truncated […]

PMCID: 3910359
PMID: 24497730
DOI: 10.6026/97320630091023

[…] a noise- reducing algorithm to predict post translational modifications of the query protein with a protein kinase., atp binding residues of gsk3b and cdk5 protein kinases were predicted by using atpint online server []. atpint is a web based tool for the prediction of atp binding residue in a protein sequence. in addition stabilization potential of the complex structure is computed by two […]


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ATPint institution(s)
Institute of Microbial Technology, Chandigarh, India
ATPint funding source(s)
Supported by the agencies Council of Scientific and Industrial Research (CSIR) and the Department of Biotechnology (DBT).

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