ATRHUNTER specifications
Information
Unique identifier | OMICS_00102 |
---|---|
Name | ATRHUNTER |
Interface | Web user interface |
Restrictions to use | None |
Computer skills | Basic |
Stability | Stable |
Maintained | Yes |
Maintainer
- person_outline Ydo Wexler
Publication for ATRHUNTER
Finding approximate tandem repeats in genomic sequences.
ATRHUNTER citations
(2)Probabilistic approaches to alignment with tandem repeats
[…] vement, with the best performing algorithm reducing the error rate by 37% compared to the baseline. It would be interesting to explore other programs for detecting tandem repeats, such as mreps [] or ATRhunter [].In addition to the baseline three-state model, we have compared our approach to other alignment programs Context [] and Muscle []. The Context program, which uses context-sensitive indels […]
Tandem repeats discovery service (TReaDS) applied to finding novel cis acting factors in repeat expansion diseases
[…] -trivial algorithms for finding TRs, even when mutations occur with non-negligible probability. Tandem Repeat Finder (TRF) [], CRISPRFinder [], mreps [], Reputer [], Approximate Tandem Repeat Hunter (ATRHunter) [], TandemSWAN [], and Tread [] are some examples of currently operational systems that can be accessed via a web interface.Comparative studies [,], for the case of short TRs with high perc […]
ATRHUNTER reviews
Be the first to review ATRHUNTER