AuberGene specifications

Information


Unique identifier OMICS_22168
Name AuberGene
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python
Computer skills Advanced
Stability Stable
Source code URL http://www.ibi.vu.nl/programs/aubergenewww/aubergene.tar.gz
Maintained Yes

Versioning


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Maintainers


  • person_outline Jaap Heringa <>
  • person_outline AuberGene Team <>

Publication for AuberGene

AuberGene in publication

PMCID: 5219027
PMID: 27900550
DOI: 10.1007/s10265-016-0878-0

[…] integrity. primary pirnas are generated from single-stranded precursor transcripts derived from genomic transposons, and secondary pirnas are amplified by the ping-pong pathway via piwi proteins, aubergene (aub) and ago3 in drosophila germlines (ghildiyal and zamore ; ishizu et al. ; malone and hannon ; sato et al. ; siomi et al. ; thomson and lin ). recently, it was reported that phased […]


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AuberGene institution(s)
Centre for Integrative Bioinformatics VU (IBIVU), Faculty of Sciences and Faculty of Earth and Life Sciences, Vrije Universiteit, HV Amsterdam, The Netherlands
AuberGene funding source(s)
Supported by the Vrije Universiteit of Amsterdam.

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