AUREA specifications

Information


Unique identifier OMICS_24436
Name AUREA
Alternative name Adaptive Unified Relative Expression Analyzer
Software type Application/Script
Interface Command line interface, Application programming interface
Restrictions to use None
Input format SOFT,CSV
Operating system Unix/Linux, Mac OS, Windows
Programming languages C++, Python, SWiG
License GNU Affero General Public License version 3
Computer skills Advanced
Stability Stable
Requirements
Tkinter
Maintained Yes

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Maintainers


  • person_outline Nathan D. Price <>
  • person_outline John Earls <>

Publication for Adaptive Unified Relative Expression Analyzer

AUREA in publication

PMCID: 3982252
PMID: 24790574
DOI: 10.1155/2014/593503

[…] all datasets are binary classification problems and mainly refer to the studies of human cancer. as the data was not predivided we used typical 10-fold cross-validation as it was the only option in aurea software []., we confront evotsp with three competitors: the primary solution tsp and its two main extensions: k-tsp and tst (tsn with n = 3). to obtain comparison results, we used the aurea […]


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AUREA institution(s)
Institute for Systems Biology, Seattle, WA, USA; Department of Computer Science and Engineering, University of Washington, Seattle, WA, USA; Department of Bioengineering, University of Illinois, Urbana, IL, USA; Center for Biophysics and Computational Biology, University of Illinois, Urbana, IL, USA; Department of Computer Science, University of Illinois, Urbana, IL, USA
AUREA funding source(s)
Supported by an NIH-NCI Howard Temin Pathway to Independence Award in Cancer Research, the Grand Duchy of Luxembourg Systems Medicine Consortium, and the Camille-Dreyfus Teacher Scholar Program (NDP).

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