Auto Threshold specifications


Unique identifier OMICS_25195
Name Auto Threshold
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Java, Shell (Bash)
License GNU General Public License version 3.0
Computer skills Advanced
Version 1.16.5
Stability Stable
Maintained Yes




No version available


Additional information

A local version of this software is available at:

Auto Threshold citation


Andy’s Algorithms: new automated digital image analysis pipelines for FIJI

Sci Rep
PMCID: 5691210
PMID: 29146920
DOI: 10.1038/s41598-017-15885-6

[…] method applies a calculation to convert any given pixel in the 8-bit grey scale pixel into either a black (background) or white (ROI) pixel and is detailed on the ImageJ website at A test montage image (Supp. Figure ) is provided to allow users to visually inspect the output of each threshold calculation and determine the most appropriate threshold for ROIs in a […]

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