AutoGRAPH specifications


Unique identifier OMICS_11722
Interface Web user interface
Restrictions to use None
Input data Preinserted datasets, Personal datasets
Output data The program output consists of: (i) a figure showing gene order relationships by means of connecting lines within each CS and conserved segments ordered (CSO), across two to three species, and identifying the evolutionary breakpoint regions delimiting CS and/or CSO; (ii) two modes, making it possible to construct comparative maps with or without one-to-zero relationship anchors, to switch the orientation of each map and to scale images by a factor of 0.5 to 2; (iii) a table listing all CS, CSO and breakpoints, with their size, number of genes, chromosome coordinates and gene density.
Programming languages PHP
Database management system MySQL
Computer skills Basic
Stability Stable
Maintained Yes


AutoGRAPH article

AutoGRAPH institution(s)
CNRS UMR6061 Génétique et Développement, Université de Rennes1 IFR140, Rennes, France

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