ASAP specifications

Unique identifier:
OMICS_14593
Interface:
Web user interface
Input data:
scRNA-seq read count data, already normalized matrix
Computer skills:
Basic
Stability:
Stable
Maintained:
Yes
Name:
Automated Single-cell Analysis Pipeline
Restrictions to use:
None
Programming languages:
Java, Python, R
Version:
1.0
Registration required:
Yes

ASAP specifications

Unique identifier:
OMICS_14593
Software type:
Package/Module
Restrictions to use:
None
Programming languages:
Python, R
Computer skills:
Advanced
Name:
Automated Single-cell Analysis Pipeline
Interface:
Command line interface
Operating system:
Unix/Linux
License:
GNU General Public License version 3.0
Stability:
Stable

versioning

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ASAP distribution

download

ASAP support

Documentation

Maintainer

  • Bart Deplancke <>
This tool is not maintained anymore.

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Credits

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Publications

Institution(s)

Institute of Bioengineering; École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland; Swiss Institute of Bioinformatics, Lausanne, Switzerland

Funding source(s)

This work has been supported by funds from the Swiss National Science Foundation (#31003A_162735 and #IZLIZ3_156815), by the Commission for Technology and Innovation (CTI), and by Institutional support from the EPFL.

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