AutoQuant pipeline

AutoQuant specifications

Information


Unique identifier OMICS_25438
Name AutoQuant
Alternative name AutoQuant X3
Software type Package/Module
Interface Graphical user interface
Restrictions to use License purchase required
Input format XML,AQH,TIF,TIFF,RAW,DEB,AVZ,BMP,SEQ,ICS,IDS,PIC,IMS,LEI,LIF,OIF,OIB,ZVI,LSM,CZI,ND2,IPL,IPLAB,ND,STK
Operating system Windows
Computer skills Medium
Stability Stable
Registration required Yes
Maintained Yes

Versioning


Add your version

Documentation


AutoQuant IN pipelines

 (2)
2015
PMCID: 4547045
PMID: 26379498
DOI: 10.3389/fncel.2015.00327

[…] projection and time-lapse. minor movement of the brain during the imaging was corrected using fiji “stack reg” plugin. for single-cell imaging processing selected data sets were deconvoluted with autoquant x3 (media cybernetics), cropped, and registered using fiji plugin “correct 3d drift” and later analyzed in imaris (bitplane) for 3d rendering and iso surface creation., for quantification […]

2014
PMCID: 4169490
PMID: 25233119
DOI: 10.1371/journal.ppat.1004390

[…] ca). z-stack immunofluorescence imaging was done on 20 cells in each sample. 3d image reconstruction was performed using imaris software (bitplane, zurich, switzerland) after image deconvolution by autoquant x3 software (mediacybernetics, rockville, md). the experiment was repeated three times. numbers of cells and n-positive cells were counted using cellprofiler software. the relative […]

AutoQuant reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review AutoQuant