B-cell epitope databases | Immunology system data analysis
B-cell epitopes (or, antibody epitopes) can be defined as regions on molecules that are specifically bound by B-cell receptors (antibodies). They can include native protein structures, linear peptides, carbohydrates and other biological macromolecules. The majority of short linear peptides have the potential to be B-cell epitopes.
A collection of immunogenic peptides.The database is consist of nearly 555 antigenic peptide with varying immunogenic activity. The each entry of the database provide complete information about the antigenic peptide.
Compiles experimental data dealing with antibody and T-cell epitopes studied in various animal species encompassing humans and non-human primates. IEDB proposes a repository allowing six types of searches, including queries by assay, host or epitope, coupled to utilities for t- or b-cell epitope prediction. Data available on this database is derived from various diseases such as allergic or infectious ones as well as from diseases associated with transplantation.
Helps students and researchers to understand all aspects of biomedicine and agriculture, from protein synthesis to health and disease. RCSB PDB is a database that provides a resource powered by the Protein Data Bank (PDB) archive - information about the 3D shapes of proteins, nucleic acids, and complex assemblies. Users can perform simple and complex queries on the data, analyze, and visualize the results.
A database of cereal prolamin epitopes, peptides and proteins for expert users that are dealing with protein chemistry, proteomics and mass spectrometry, method developments and related applications in food science, agricultural breeding or medical studies. ProPepper™ contains the full scale of currently available prolamin sequences and specific in silico digested peptide entries, links to reference databases (Uniprot, NCBI & IEDB) and cross-referenced connections. The interface allows advanced global and parametric search functions along with a download option, with direct connections to the relevant public databases.
Provides access to well-documented and tested epitope-related tools through a common style of web interface. IEDB-AR is a database that allows users to easily make direct comparisons between and among various prediction methods. The IEDB-AR provides five analytical tools for: (i) calculating the epitope population coverage; (ii) assessing the degree of conservancy of an epitope; (iii) visualization and analysis of 3D structures of molecules containing epitopes; (iv) clustering of epitope sequences and (v) mapping of epitopes onto 3D protein structures.