Dataset features

Specifications


Application: ChIP-seq analysis, RNA-seq analysis
Number of samples: 14
Release date: May 28 2016
Last update date: Sep 20 2018
Access: Public
Dataset link Requirement for flap endonuclease 1 (FEN1) to maintain genomic stability and transcriptional gene silencing in Arabidopsis

Experimental Protocol


To characterized the role of FEN1 in epigenetic silencing, we examine histone modification and RNA expression changes by whole-genome RNA sequencing; H3K27me3-, H3K4me3-, H3K9me2-, H3-ChIP-seq in A. thaliana transgenic wild type (TWT) and fen1 mutant

Repositories


GEO

GSE79738

ArrayExpress

E-GEOD-79738

ENA

SRP072577

BioProject

PRJNA316877

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Contact


Jinkui Cheng