Dataset features

Specifications


Application: Gene expression microarray analysis
Number of samples: 20
Release date: Nov 22 2018
Last update date: Nov 22 2018
Access: Public
Dataset link Analysis of gene expression in grape berries due to diurnal effects (DIU_05).

Experimental Protocol


Eight time points during the diurnal cycle were analyzed at preveraison and post veraison for gene expression changes using the Affymetrix one colour array platform. Two biological replicates were collected for each developmental stage. Biotin labeled probes were prepared from the extracted RNA from each of the pooled berry samples and hybridized to the Vitis vinifera GeneChip. The sample/GeneChip position on the Affymetrix hybridization station was randomized using the AlgDesign package from R.

Repositories


GEO

GSE7749

BioProject

PRJNA99867

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Contact


Mark Thomas