Dataset features

Specifications


Application: Gene expression microarray analysis, DNA methylation array analysis
Number of samples: 137
Release date: Aug 4 2014
Last update date: Jul 25 2018
Access: Public
Genes: LINC-ROR, POU5F1, SOX2, KLF4
Taxon: Homo sapiens
Dataset link Critical role of transient activation of human endogenous retroviruses during reprogramming toward pluripotency

Experimental Protocol


Four human induced pluripotent stem cell lines were subcloned into 55 separate lines. Bisulfite converted genomic DNA lysates from fibroblast, induced pluripotent stem cell, intermediate reprogrammed cell and embryonic stem cell lines were hybridized to Illumina HumanMethylation450 BeadChip.

Repositories


GEO

GSE54848

ArrayExpress

E-GEOD-54848

BioProject

PRJNA237810

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Contact


Kazutoshi Takahashi