Dataset features

Specifications


Application: ChIP-seq analysis, RNA-seq analysis
Number of samples: 6
Release date: Aug 5 2013
Last update date: Jul 20 2018
Access: Public
Computational protocol: TopHat, Cufflinks, Scripture, Trinity, SAMSeq
Dataset link A pseudogene lncRNA at the interface of inflammation and anti-inflammatory therapeutics

Experimental Protocol


RNA profiles of wild type (WT) MEFs treated with TNF-alpha were generated by deep sequencing using Illumina GAIIx. Examination of H3K4me3 histome modification in MEF.

Repositories


GEO

GSE47494

ArrayExpress

E-GEOD-47494

ENA

SRP023473

BioProject

PRJNA205994

Download


Contact


Kun Qu

Dataset Statistics

info

Citations per year

Dataset publication