Dataset features

Specifications


Application: ChIP-seq analysis
Number of samples: 4
Release date: Mar 17 2012
Last update date: Sep 28 2018
Access: Public
Diseases: Melanoma, Tumor Lysis Syndrome
Mutations: p|SUB|V|600|E
Dataset link Recurrent amplifications of the histone methyltransferase SETDB1 in melanoma

Experimental Protocol


DNA was enriched from short-term cultures of cells and chromatin immunoprecipitations (ChIPs) were analyzed by Solexa sequencing. ChIPs were performed using an antibody against SetDB1 in WM853.2. Whole cell extracts are provided for WM262, WM451Lu and WM853.2 cells.

Repositories


GEO

GSE36579

ArrayExpress

E-GEOD-36579

ENA

SRP011563

BioProject

PRJNA153741

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Contact


Richard Young
Richard A Young