Dataset features

Specifications


Application: RNA-seq analysis
Number of samples: 27
Release date: Sep 1 2015
Last update date: Oct 18 2018
Access: Public
Diseases: Testicular Neoplasms
Dataset link Analysis of human, chimpanzee, macaque and mouse tissue transcriptomes using Next Generation Sequencing

Experimental Protocol


We generated RNA-Seq data (∼2.10 billion paired-end reads, 25-100 bp length) for the polyadenylated RNA fraction of brain (cerebral cortex), heart, liver and testis. In human and chimpanzee, we generated 2 samples per tissue corresponding to different individuals. In macaque, only 1 sample per tissue was generated. In mouse, considered as the evolutionary outgroup, we generated three pools of brain samples, and one pool of heart, liver and testis samples. We generated an additional sample in Testis without including reverse transcriptase as a control of DNA contamination.

Repositories


GEO

GSE69241

ArrayExpress

E-GEOD-69241

ENA

SRP058740

BioProject

PRJNA285021

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Contact


Jorge Ruiz-Orera

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