Bacmeta specifications


Unique identifier OMICS_20603
Name Bacmeta
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input format ASCII
Output format TXT, CSV
Operating system Unix/Linux, Mac OS, Windows
Programming languages C++
License BSD 3-clause “New” or “Revised” License
Computer skills Advanced
Version 1.0.0
Stability Stable
C++11, g++ compiler, cygwin (for Windows)
Maintained Yes



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  • person_outline Aleksi Sipola <>
  • person_outline Jukka Corander <>

Publication for Bacmeta

Bacmeta institution(s)
Department of Mathematics and Statistics, University of Helsinki, Helsinki, Finland; Helsinki Institute for Information Technology HIIT, Department of Computer Science, Aalto University, Aalto, Finland; Pathogen Genomics, Wellcome Trust Sanger Institute, Cambridge, UK; Department of Biostatistics, University of Oslo, Oslo, Norway
Bacmeta funding source(s)
Supported by the Academy of Finland (COIN Centre of Excellence and grants 286607 and 294015) and ERC (grant 742158).

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