Bacterial sRNA data | Non-coding RNA analysis

Bacterial small regulatory RNA databases | Non-coding transcript data analysis

Bacterial sRNAs are a class of small regulatory RNAs of about 40–500 nt in length. They comprise three groups. The first group includes cis-acting sRNAs, which perfectly match their targets with overlapping regions. The second group is comprised of trans-acting sRNAs, which imperfectly match their targets and show separation regions. The third group includes protein-binding sRNAs.

ncRNAdb / Noncoding RNAs database

Gathers information about sequences and functions of transcripts which performs regulatory roles in the cell without protein-coding capacity. ncRNAdb contains about 30 000 sequences from 99 organisms. The database includes both documented RNAs and expressed sequences of Non-Coding RNAs (ncRNAs) with unknown role in cells from several class of transcripts or taxonomic groups. Searches can be made by organism name, RNA symbol or GenBank accession number and a BLAST server to perform sequence similarity searches is provided.

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