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BacWGSTdb specifications

Information


Unique identifier OMICS_10196
Name BacWGSTdb
Restrictions to use None
Maintained Yes

Maintainer


  • person_outline Ye Feng

Publication for BacWGSTdb

BacWGSTdb citations

 (2)
library_books

Glimpse into the genome sequence of a multidrug resistant Acinetobacter pittii ST950 clinical isolate carrying the bla OXA 72 and bla OXA 533 genes in China

2017
PMCID: 5607522
PMID: 28954001
DOI: 10.1590/0074-02760170019

[…] COG) functional categories was analysed with the WebMGA web server (). PathogenFinder 1.1, ResFinder 2.1, CARD 2017, VirulenceFinder 1.5, PlasmidFinder 1.3, MLST 1.8 (MultiLocus Sequence Typing), and BacWGSTdb were used to estimate the number of pathogenicity determinants, acquired antibiotic resistance genes, virulence genes, plasmids and the sequence type (ST) using the assembled genome (, , , , […]

library_books

Acinetobacter seifertii Isolated from China

2016
PMCID: 4782885
PMID: 26945401
DOI: 10.1097/MD.0000000000002937

[…] the gene sequence. Phylogenetic reconstruction was performed using the core genes were shared by the genome of the compared Acinetobacter spp. strains with the MEGA 5.0 Maximum-likelihood program and BacWGSTdb platform., The similarity of protein-encoding genes and average amino acid among A. seifertii, A. baumannii, and A. nosocomials was converted to a Venn diagram using R (http://www.r-project. […]


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BacWGSTdb institution(s)
Sir Run Run Shaw Hospital, School of Medicine, Zhejiang University, Hangzhou, China; Institute of Translational Medicine, School of Medicine, Zhejiang University, Hangzhou, China
BacWGSTdb funding source(s)
National Natural Science Foundation of China [81201248, 81401698]

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