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Badapple specifications

Information


Unique identifier OMICS_12048
Name Badapple
Alternative name Bioassay-data associative promiscuity pattern learning engine
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Cristian Bologa <>

Publication for Bioassay-data associative promiscuity pattern learning engine

Badapple in publications

 (3)
PMCID: 5364449
PMID: 28386587
DOI: 10.1021/acscentsci.7b00069

[…] sar is the most important criterion that distinguishes a pain from a non-pain. as for any screening hit, literature review for evidence of chemotype promiscuity is essential, and in this context, badapple is an excellent resource that merits special mention., compounds that absorb light or fluoresce in a region used to measure activity, or compounds that inhibit a reporter enzyme, like […]

PMCID: 5249037
PMID: 28105916
DOI: 10.1186/s12859-016-1342-9

[…] region around this center.toxicityin order to remove probable toxic molecules, the side effects of the finally identified compounds were detected using toxicity predictors such as pains-remover, badapple and protox webservers [–]. , step 1: gpcr identification in fg proteome., the fusarium graminearum genome was firstly published in 2007 []. the complete proteome of fusarium graminearum […]

PMCID: 4710605
PMID: 25978103
DOI: 10.1289/ehp.1409450

[…] active site (). in the present study, the smiles strings of the 20 high priority chemicals were entered into the open-source bioactivity data associative promiscuity pattern learning engine (badapple plugin) () and into moe to evaluate the promiscuity of these chemicals. both programs yielded high promiscuity scores for gentian violet, likely due to interference of the dye with assay […]


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Badapple institution(s)
Translational Informatics Division, Department of Internal Medicine, University of New Mexico School of Medicine, Albuquerque, NM, USA
Badapple funding source(s)
This work was supported by National Institutes of Health Awards U54 MH074425, U54 MH084690, R21 GM095952 and U54 CA189205 (UNM).

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