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BADGE specifications

Information


Unique identifier OMICS_05836
Name BADGE
Alternative name Bayesian Analysis of Dispersed Gene Expression
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Jianhua Xuan <>

Publication for Bayesian Analysis of Dispersed Gene Expression

BADGE in publication

PMCID: 4631466
PMID: 26539333
DOI: 10.7717/peerj.1360

[…] in the present study., methods initially developed to analyze unreplicated rna-seq data sets., non-parametric method., programming language: c/c+ + for gfold, cuffdiff2 and bitseq; matlab for badge; r for the rest., comparisons involving methods specifically designed for unreplicated experiments received little attention, despite the abundance of such type of rna-seq data. […]


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BADGE institution(s)
Department of Electrical and Computer Engineering, Virginia Polytechnic Institute and State University, VA, USA; Department of Oncology, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, DC, USA
BADGE funding source(s)
Supported by National Institutes of Health (NIH) [CA149653, CA149147, CA164384, and NS29525-18A].

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