Protocols

BAGET specifications

Information


Unique identifier OMICS_26457
Name BAGET
Alternative name Bacterial and Archaeal Gene Exploration Tool
Restrictions to use None
Community driven No
Data access File download, Browse
User data submission Not allowed
Maintained Yes

Maintainer


  • person_outline Jacques Oberto

Publication for Bacterial and Archaeal Gene Exploration Tool

BAGET citations

 (2)
call_split

Comparative genomics reveals conserved positioning of essential genomic clusters in highly rearranged Thermococcales chromosomes

2015
Biochimie
PMCID: 4640148
PMID: 26166067
DOI: 10.1016/j.biochi.2015.07.008
call_split See protocol

[…] DNA sequence corresponding to the 16S ribosomal RNA genes were retrieved using the BAGET web service at http://archaea.u-psud.fr/bin/baget.dll . PhyML phylogeny was computed using web service http://phylogeny.lirmm.fr/ . […]

library_books

Qri7/OSGEPL, the mitochondrial version of the universal Kae1/YgjD protein, is essential for mitochondrial genome maintenance

2009
Nucleic Acids Res
PMCID: 2760799
PMID: 19578062
DOI: 10.1093/nar/gkp557

[…] ed for the graphical representation of sequence alignments and similarity analysis. Prediction of the mitochondrial localization was carried out by Mitoprot (http://ihg.gsf.de/ihg/mitoprot.html). The BAGET web server (http://archaea.u-psud.fr/bin/baget.dll) provided assistance for the identification the open reading frames and the design of the oligonucleotides for bacterial gene cloning (). […]

BAGET institution(s)
Biologie Moleculaire du Gene chez les Extremophiles, Universite Paris-Sud, Institut de Genetique et Microbiologie, CNRS UMR8621, Orsay, France
BAGET funding source(s)
Supported by “Centre National pour la Recherche Scientifique” (CNRS).

BAGET reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review BAGET