Bagheera statistics

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Bagheera specifications

Information


Unique identifier OMICS_19576
Name Bagheera
Interface Web user interface
Restrictions to use None
Programming languages Ruby
License GNU CC license
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Martin Kollmar <>

Additional information


http://www.motorprotein.de/bagheera/help

Information


Unique identifier OMICS_19576
Name Bagheera
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Ruby
License GNU CC license
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


Add your version

Maintainer


  • person_outline Martin Kollmar <>

Additional information


http://www.motorprotein.de/bagheera/help

Publication for Bagheera

Bagheera in publications

 (8)
PMCID: 5477333
PMID: 28522723
DOI: 10.1128/genomeA.00373-17

[…] that 5,037 of them have at least one gene ontology (go) term., some candida species, particularly candida albicans, translate the cug codon as serine instead of leucine; therefore, we have used the bagheera server (http://www.motorprotein.de/bagheera) to analyze the cug codon translation of the genes from c. aaseri sh-14 (). the prediction suggested that c. aaseri sh-14 belongs to the cug:ser […]

PMCID: 5413892
PMID: 28479981
DOI: 10.1098/rsfs.2016.0121

[…] its derived, ecologically homogeneous lifestyle. we might expect a similar anomalous pattern for other secondarily herbivorous clades, such as therizinosaur theropod dinosaurs and the jumping spider bagheera kiplingi. this example illustrates another way in which diachronic evolutionary theory can help inform synchronic understandings of animal cognition: the panda's homogeneous environment, […]

PMCID: 5668680
PMID: 29104823
DOI: 10.7717/peerj.3972

[…] a lot of attention from social media. as far as spiders are concerned, taxonomists have been inspired by well-known literature characters and writers [e.g., the jungle book by rudyard kipling: bagheera kiplingi (saticidae) (); harry potter books by j.k. rowling: the hat-looking spider eriovixia gryffindori (araneidae) (); orson welles and william shakespeare: orsonwelles macbeth […]

PMCID: 5006800
PMID: 27617098
DOI: 10.1016/j.nmni.2016.07.003

[…] package . the functional annotation was performed using the clusters of orthologous groups of proteins (cogs) database . to determine that c. auris belongs to the cug candida clade, a webserver bagheera was used to identify cug codon usage in c. auris genomes., average nucleotide identity (ani) was calculated using the jspecies package using mummer (anim). five candida auris genomes […]

PMCID: 5046164
PMID: 27721526
DOI: 10.1177/0091450916662164

[…] from 30–90 minutes. also slightly changes my voice, another first. pinpoint pupils as usual.in conclusion, u-47700 exceeded my expectations. a wonderful compound at that.be safe everyone, cheers! (bagheera, thread, retrieved april 2015)bagheera’s report illustrates how forum participants, even in short communications, share information on how substances were administered, the effects […]


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Bagheera institution(s)
Group Systems Biology of Motor Proteins, Department of NMR-based Structural Biology, Max-Planck-Institute for Biophysical Chemistry, Göttingen, Germany
Bagheera funding source(s)
Supported by grant KO 2251/13-1 of the Deutsche Forschungsgemeinschaft (DFG) and partly by the Göttingen Graduate School of Neurosciences and Molecular Biosciences (DFG Grants GSC 226/1 and GSC 226/2).

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