BaMBa statistics
Tool stats & trends
Looking to identify usage trends or leading experts?

Protocols
BaMBa specifications
Information
Unique identifier | OMICS_12502 |
---|---|
Name | BaMBa |
Alternative name | Brazilian Marine Biodiversity |
Restrictions to use | None |
Community driven | No |
Data access | File download, Browse |
User data submission | Allowed |
Maintained | Yes |
Maintainer
- person_outline BaMBa Team
Publication for Brazilian Marine Biodiversity
BaMBa citations
(6)Application of a newly developed software program for image quality assessment in cone beam computed tomography
[…] pen-source software and allows one to add, adjust, or implement other functions within the plugin. Since ImageJ is free software, this is an inexpensive method, as it does not require a user license. Bamba et al. considered this approach very useful and encouraged the development of plugins in ImageJ to evaluate image quality in CBCT with phantoms. Donini et al. showed the feasibility of software […]
Taxonomic and Functional Metagenomic Signature of Turfs in the Abrolhos Reef System (Brazil)
[…] 4644.3, 4564648.3, 4564643.3, 4564645.3; and fasta files are available at https://marinebiodiversity.lncc.br/files/index.php/s/3HqRMATuGDQWDU6 (fthompson.6.1) (Brazilian Marine Biodiversity Database, BaMBa). […]
The First Temporal and Spatial Assessment of Vibrio Diversity of the Surrounding Seawater of Coral Reefs in Ishigaki, Japan
[…] aensis, V. communis, V. campbellii, and P. damselae subsp. piscicida, a >99.7% cutoff was adopted to affiliate species. All pyrH and 16S rRNA genes sequences used in this study have been deposited in BaMBa under data package identification number pmeirelles.20.1. To further affiliate unassigned pyrH clusters to new species candidates, 16S rRNA gene sequences of 38 representative strains from pyrH […]
Individual Apostichopus japonicus fecal microbiome reveals a link with polyhydroxybutyrate producers in host growth gaps
[…] est sea cucumbers, we used the MG-RAST workbench tool implementing KEGG Orthology and GenBank databases to annotate with the functional features.All sequences generated in this study are deposited in BaMBa under data package identification number pmeirelles.19.1, and DDBJ/GenBank/EMBL database under BioProject number PRJDB4366. […]
Insights into the Microbial and Viral Dynamics of a Coastal Downwelling Upwelling Transition
[…] y available in the MG-Rast website, where it is deposited as part of the “Upwelling Arraial do Cabo” project (http://metagenomics.anl.gov/linkin.cgi?project=2518), or alternatively it is available in BAMBA (Meirelles et al. in press), under project identifier (https://marinebiodiversity.lncc.br/metacatui/#view/pmeirelles.17.1).” […]
MSClust: a tool for unsupervised mass spectra extraction of chromatography mass spectrometry ion wise aligned data
[…] on followed by their chromatographic alignment, i.e. ion-wise alignment, has become a popular approach for comparative metabolomics. Software tools that can implement this approach, such as MetAlign (Bamba and Fukusaki ; Boccard et al. ; De Vos et al. ; Ducruix et al. ; Keurentjes et al. ; Lommen ; Lommen et al. ; Mal et al. ; Peters et al. ; Rijk et al. ; Tikunov et al. ; Tikunov et al. ; Vorst e […]
Citations
Looking to check out a full list of citations?

BaMBa reviews
Be the first to review BaMBa